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  5. Glyma.17G154800

Glyma.17G154800


Description : lsd one like 1


Gene families : OG_42_0001639 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G154800
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Brara.A01111.1 No alias regulatory protein *(LSD/LOL) of programmed cell death 0.02 Orthogroups_2024-Update
LOC_Os08g03610 No alias LSD1 zinc finger domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G143900 No alias lsd one like 1 0.03 Orthogroups_2024-Update
Pp1s11_54V6 No alias zinc finger protein 0.03 Orthogroups_2024-Update
Sopen08g025640 No alias LSD1 zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0043189 H4/H2A histone acetyltransferase complex IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902562 H4 histone acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 28 52
IPR005735 Znf_LSD1 105 129
IPR005735 Znf_LSD1 67 91
No external refs found!