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  5. Glyma.17G170300

Glyma.17G170300


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G170300
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
A4A49_04523 No alias floral homeotic protein apetala 2 0.04 Orthogroups_2024-Update
At1g16060 No alias AP2-like ethylene-responsive transcription factor... 0.03 Orthogroups_2024-Update
Bradi1g69209 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Brara.B01213.1 No alias AP2-type transcription factor *(WRI/AIL) 0.03 Orthogroups_2024-Update
Brara.B02033.1 No alias AP2-type transcription factor *(WRI/AIL) 0.04 Orthogroups_2024-Update
Cre01.g009650 No alias AINTEGUMENTA-like 5 0.03 Orthogroups_2024-Update
Cre02.g100100 No alias AINTEGUMENTA-like 5 0.02 Orthogroups_2024-Update
Cre10.g441300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Cre19.g750947 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Glyma.01G195900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G091200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G329700 No alias related to AP2.7 0.03 Orthogroups_2024-Update
HORVU2Hr1G113880.23 No alias AP2-type transcription factor *(WRI/AIL) 0.03 Orthogroups_2024-Update
MA_130948g0020 No alias (at2g28550 : 293.0) related to AP2.7 (RAP2.7); CONTAINS... 0.02 Orthogroups_2024-Update
MA_2193g0020 No alias (at4g36920 : 276.0) Encodes a floral homeotic gene, a... 0.04 Orthogroups_2024-Update
PSME_00008190-RA No alias (at4g36920 : 177.0) Encodes a floral homeotic gene, a... 0.03 Orthogroups_2024-Update
PSME_00019830-RA No alias (at4g36920 : 277.0) Encodes a floral homeotic gene, a... 0.03 Orthogroups_2024-Update
PSME_00040413-RA No alias (at2g41710 : 299.0) Integrase-type DNA-binding... 0.03 Orthogroups_2024-Update
Potri.003G205700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G148400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G181000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.016G084500 No alias related to AP2.7 0.03 Orthogroups_2024-Update
Pp1s131_131V6 No alias ap2 domain-containing transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G214300.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Sobic.004G237100.1 No alias AP2-type transcription factor *(WRI/AIL) 0.05 Orthogroups_2024-Update
Solyc01g096860 No alias AP2-like ethylene-responsive transcription factor (AHRD... 0.02 Orthogroups_2024-Update
Sopen09g002130 No alias AP2 domain 0.02 Orthogroups_2024-Update
evm.model.tig00020710.12 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 176 225
IPR001471 AP2/ERF_dom 268 318
No external refs found!