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  5. Glyma.17G176600

Glyma.17G176600


Description : Histone superfamily protein


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G176600
Cluster HCCA clusters: Cluster_539

Target Alias Description ECC score Gene Family Method Actions
At1g13370 No alias Histone H3-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX60] 0.02 Orthogroups_2024-Update
GRMZM2G179005 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G355773 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G031580.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G100450.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
LOC_Os04g34240 No alias histone H3, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00015728-RA No alias (at5g65360 : 167.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00017144-RA No alias (at5g10980 : 144.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00020261-RA No alias (at5g10980 : 95.9) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.001G016900 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Potri.002G026800 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G198000.1 No alias histone H3 variant *(CENH3) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 116
No external refs found!