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  5. Glyma.17G180500

Glyma.17G180500


Description : SKU5 similar 15


Gene families : OG_42_0000592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G180500
Cluster HCCA clusters: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
Seita.4G261600.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Sopen01g054020 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update
Sopen02g035060 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 381 520
IPR011707 Cu-oxidase_3 35 148
IPR001117 Cu-oxidase 161 297
No external refs found!