Sopen10g015820

Description : Ras family

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g015820
Cluster	HCCA clusters: Cluster_310

Target	Alias	Description	ECC score	Gene Family Method
145965	No alias	RAB GTPase 11C	0.02	Orthogroups_2024-Update
At3g46830	No alias	Ras-related protein RABA2c...	0.02	Orthogroups_2024-Update
GRMZM2G020544	No alias	RAB GTPase 11C	0.02	Orthogroups_2024-Update
GRMZM2G029486	No alias	RAB GTPase 11C	0.02	Orthogroups_2024-Update
HORVU5Hr1G080990.3	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os05g20050	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
Seita.3G145900.1	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
Sobic.001G261597.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Solyc11g010100	No alias	Ras-related protein Rab11D (AHRD V3.3 *** RB11D_TOBAC)	0.03	Orthogroups_2024-Update
evm.model.contig_435.23	No alias	(q39572\|yptc6_chlre : 307.0) Ras-related protein YPTC6 -...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!