Glyma.17G228700

Description : cytokinin-responsive gata factor 1

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.17G228700
Cluster	HCCA clusters: Cluster_379

Target	Alias	Description	ECC score	Gene Family Method
A4A49_09786	No alias	gata transcription factor 2	0.03	Orthogroups_2024-Update
At4g26150	No alias	Putative GATA transcription factor 22...	0.03	Orthogroups_2024-Update
At4g36620	No alias	GATA transcription factor 19...	0.03	Orthogroups_2024-Update
Brara.B03483.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.C01244.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.C04348.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Brara.E02479.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Brara.G01643.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Brara.I03425.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Brara.K01308.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
HORVU6Hr1G088370.6	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
LOC_Os10g40810	No alias	GATA zinc finger domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g07120	No alias	GATA zinc finger domain containing protein, expressed	0.04	Orthogroups_2024-Update
MA_110551g0010	No alias	(at5g56860 : 90.1) Encodes a member of the GATA factor...	0.03	Orthogroups_2024-Update
PSME_00007174-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00026073-RA	No alias	(at5g66320 : 163.0) Encodes GATA transcription factor...	0.03	Orthogroups_2024-Update
Seita.1G034200.1	No alias	transcription factor *(A/B-GATA)	0.05	Orthogroups_2024-Update
Solyc01g090760	No alias	GATA transcription factor (AHRD V3.3 *** K4AZ17_SOLLC)	0.02	Orthogroups_2024-Update
Solyc09g075610	No alias	GATA transcription factor, putative (AHRD V3.3 *** B9RNI7_RICCO)	0.04	Orthogroups_2024-Update
Solyc11g069510	No alias	GATA transcription factor (AHRD V3.3 *** V7C3K3_PHAVU)	0.02	Orthogroups_2024-Update
Sopen01g036490	No alias	GATA zinc finger	0.07	Orthogroups_2024-Update
Sopen03g006450	No alias	GATA zinc finger	0.03	Orthogroups_2024-Update
Sopen09g030410	No alias	GATA zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
MF	GO:0070569	uridylyltransferase activity	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	173	207

External Links

No external refs found!

Glyma.17G228700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation