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  5. Glyma.17G242100

Glyma.17G242100


Description : cold regulated gene 27


Gene families : OG_42_0003967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G242100
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
448001 No alias cold regulated gene 27 0.03 Orthogroups_2024-Update
At4g33980 No alias BEST Arabidopsis thaliana protein match is: cold... 0.04 Orthogroups_2024-Update
At5g42900 No alias Cold regulated protein 27 [Source:UniProtKB/TrEMBL;Acc:Q8L8T7] 0.03 Orthogroups_2024-Update
Brara.F03834.1 No alias night-time repressor *(COR27) 0.04 Orthogroups_2024-Update
Brara.K00969.1 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
GRMZM2G130232 No alias Function unknown 0.03 Orthogroups_2024-Update
GRMZM5G815358 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
MA_48561g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.002G125900 No alias cold regulated gene 27 0.04 Orthogroups_2024-Update
Potri.014G029000 No alias cold regulated gene 27 0.03 Orthogroups_2024-Update
Seita.9G250300.1 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
Seita.9G515800.1 No alias night-time repressor *(COR27) 0.04 Orthogroups_2024-Update
Sobic.001G480400.1 No alias night-time repressor *(COR27) 0.03 Orthogroups_2024-Update
Solyc04g078880 No alias Cold regulated gene 27, putative isoform 1 (AHRD V3.3... 0.06 Orthogroups_2024-Update
Sopen04g032480 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!