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  5. Glyma.17G259000

Glyma.17G259000


Description : Calcium-dependent lipid-binding (CaLB domain) family protein


Gene families : OG_42_0000345 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.17G259000
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_56428 No alias synaptotagmin-4 0.05 Orthogroups_2024-Update
Brara.J02761.1 No alias membrane tethering protein (SYT1) of... 0.04 Orthogroups_2024-Update
Kfl00130_0160 kfl00130_0160_v1.1 (at5g11100 : 194.0) SYTD; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
LOC_Os04g55220 No alias C2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.002G150700 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Orthogroups_2024-Update
Potri.005G241700 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Orthogroups_2024-Update
Sobic.002G393700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g111520 No alias Calcium-dependent lipid-binding (CaLB domain) family... 0.05 Orthogroups_2024-Update
Sopen01g053560 No alias C2 domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 247
IPR000008 C2_dom 419 521
IPR000008 C2_dom 260 361
No external refs found!