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  5. Glyma.18G013800

Glyma.18G013800


Description : RING/U-box superfamily protein


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G013800
Cluster HCCA clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
Brara.I04236.1 No alias E3 ubiquitin ligase *(BRH) 0.04 Orthogroups_2024-Update
PSME_00003461-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.010G133300 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
Seita.7G025900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G046400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g054370 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT5G41400.1) 0.02 Orthogroups_2024-Update
Sopen04g024160 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.contig_481.14 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.contig_522.14 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 88 131
No external refs found!