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  5. Glyma.18G036400

Glyma.18G036400


Description : rubisco activase


Gene families : OG_42_0002704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002704_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G036400
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
268623 No alias rubisco activase 0.07 Orthogroups_2024-Update
Bradi4g09125 No alias rubisco activase 0.06 Orthogroups_2024-Update
Brara.C02027.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 Orthogroups_2024-Update
Cre04.g229300 No alias rubisco activase 0.03 Orthogroups_2024-Update
HORVU4Hr1G027260.8 No alias ATP-dependent activase involved in RuBisCo regulation 0.04 Orthogroups_2024-Update
Kfl00238_0010 kfl00238_0010_v1.1 (at2g39730 : 589.0) Rubisco activase, a nuclear-encoded... 0.04 Orthogroups_2024-Update
LOC_Os11g47970 No alias AAA-type ATPase family protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_10433855g0010 No alias (p93431|rca_orysa : 732.0) Ribulose bisphosphate... 0.04 Orthogroups_2024-Update
Mp3g03990.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.03 Orthogroups_2024-Update
Pp1s199_130V6 No alias ribulose bisphosphate carboxylase oxygenase chloroplast expressed 0.03 Orthogroups_2024-Update
Pp1s244_85V6 No alias ribulose bisphosphate carboxylase oxygenase activase chloroplast 0.02 Orthogroups_2024-Update
Pp1s258_44V6 No alias ribulose bisphosphate carboxylase oxygenase activase chloroplast 0.05 Orthogroups_2024-Update
Pp1s5_83V6 No alias ribulose bisphosphate carboxylase oxygenase activase chloroplast 0.03 Orthogroups_2024-Update
Seita.8G251200.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.03 Orthogroups_2024-Update
Sobic.005G231500.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 Orthogroups_2024-Update
Sobic.005G231600.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.03 Orthogroups_2024-Update
Solyc10g086580 No alias Ribulose bisphosphate carboxylase/oxygenase activase... 0.08 Orthogroups_2024-Update
Sopen09g005830 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update
Sopen10g035980 No alias ATPase family associated with various cellular activities (AAA) 0.04 Orthogroups_2024-Update
evm.model.tig00020848.91 No alias (p10871|rca_spiol : 291.0) Ribulose bisphosphate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034311 diol metabolic process IEP Predicted GO
BP GO:0034312 diol biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 168 309
No external refs found!