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  5. Glyma.18G047800

Glyma.18G047800


Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG_42_0000666 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G047800
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Brara.B00930.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g29260 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_740280g0010 No alias (at1g65690 : 184.0) Late embryogenesis abundant (LEA)... 0.03 Orthogroups_2024-Update
Potri.004G197600 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Potri.017G154000 No alias NDR1/HIN1-like 25 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 116 218
No external refs found!