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  5. Glyma.18G054200

Glyma.18G054200


Description : ovate family protein 3


Gene families : OG_42_0000150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G054200
Cluster HCCA clusters: Cluster_361

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G026927 No alias ovate family protein 4 0.02 Orthogroups_2024-Update
GRMZM2G040673 No alias ovate family protein 6 0.03 Orthogroups_2024-Update
GRMZM2G127431 No alias ovate family protein 4 0.04 Orthogroups_2024-Update
Glyma.03G036600 No alias ovate family protein 2 0.03 Orthogroups_2024-Update
LOC_Os02g45620 No alias DUF623 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g36970 No alias DUF623 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.7G115500.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
Sobic.003G262000.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
Solyc02g072030 No alias LOW QUALITY:ovate family protein 5 0.03 Orthogroups_2024-Update
Sopen01g003340 No alias Transcriptional repressor, ovate 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025830 DNA_bnd_dom_ovate 1 47
IPR006458 Ovate_C 324 380
No external refs found!