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  5. Glyma.18G064401

Glyma.18G064401


Description : Histone superfamily protein


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G064401
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
167497 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
233579 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.05 Orthogroups_2024-Update
A4A49_59902 No alias histone h4 0.06 Orthogroups_2024-Update
A4A49_60016 No alias histone h4 0.06 Orthogroups_2024-Update
A4A49_61887 No alias histone h4 0.03 Orthogroups_2024-Update
AC196961.2_FG003 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
AC212565.3_FG001 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
AC233865.1_FG001 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
At1g07820 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.06 Orthogroups_2024-Update
At2g28740 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.07 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.03 Orthogroups_2024-Update
Brara.C01220.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.C01885.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.D02284.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.F00466.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.G01399.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.H02899.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.I03658.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.I05338.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Cre06.g264600 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g265450 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268000 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g274150 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.07 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.04 Orthogroups_2024-Update
Cre12.g504600 No alias histone H4 0.02 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.05 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre16.g649950 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G084195 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G421279 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G133500 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G020040.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU1Hr1G020060.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU1Hr1G073680.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU2Hr1G098340.4 No alias histone *(H4) 0.06 Orthogroups_2024-Update
HORVU3Hr1G088160.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU4Hr1G063260.2 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Kfl00240_g19 kfl00240_g19_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Kfl00394_0030 kfl00394_0030_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_97951g0010 No alias (at5g59970 : 160.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Mp4g03080.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp4g03090.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.04 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Seita.2G301400.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Seita.7G212600.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Sobic.004G279601.1 No alias histone *(H4) 0.02 Orthogroups_2024-Update
Sobic.009G167500.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.05 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.08 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.08 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.08 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.08 Orthogroups_2024-Update
Sopen05g033090 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g001390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g001400 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g028560 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
Sopen06g032280 No alias Core histone H2A/H2B/H3/H4 0.07 Orthogroups_2024-Update
Sopen06g032360 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen11g030510 No alias Core histone H2A/H2B/H3/H4 0.08 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.08 Orthogroups_2024-Update
evm.model.contig_2255.1 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!