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  5. Glyma.18G067300

Glyma.18G067300


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0001263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G067300
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
At1g07350 No alias Serine/arginine-rich splicing factor SR45a... 0.05 Orthogroups_2024-Update
Bradi3g34860 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
GRMZM2G073567 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.05 Orthogroups_2024-Update
HORVU4Hr1G060940.5 No alias splicing factor *(SR45a) 0.08 Orthogroups_2024-Update
LOC_Os03g15890 No alias RNA recognition motif containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00008516-RA No alias (at4g35785 : 94.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
Seita.9G457400.1 No alias splicing factor *(SR45a) 0.03 Orthogroups_2024-Update
Sobic.001G426800.1 No alias splicing factor *(SR45a) 0.03 Orthogroups_2024-Update
Sopen06g033060 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 52 121
No external refs found!