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  5. Glyma.18G072200

Glyma.18G072200


Description : cation exchanger 5


Gene families : OG_42_0000685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000685_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G072200
Cluster HCCA clusters: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G058300 No alias cation exchanger 3 0.03 Orthogroups_2024-Update
Glyma.15G001600 No alias cation exchanger 2 0.03 Orthogroups_2024-Update
LOC_Os05g51610 No alias sodium/calcium exchanger protein, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s21_141V6 No alias ca2+ antiporter cation exchanger 0.03 Orthogroups_2024-Update
Seita.3G034000.1 No alias cation antiporter *(CAX) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 305 444
IPR004837 NaCa_Exmemb 113 269
No external refs found!