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  5. Glyma.18G075000

Glyma.18G075000


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein


Gene families : OG_42_0005147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G075000
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
437511 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 Orthogroups_2024-Update
At4g26600 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 Orthogroups_2024-Update
Bradi3g56470 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.1 Orthogroups_2024-Update
Brara.A01647.1 No alias rRNA methyltransferase *(NOP2) 0.09 Orthogroups_2024-Update
Brara.B01299.1 No alias rRNA methyltransferase *(NOP2) 0.06 Orthogroups_2024-Update
Cre06.g273413 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.06 Orthogroups_2024-Update
HORVU6Hr1G072030.1 No alias rRNA methyltransferase *(NOP2) 0.07 Orthogroups_2024-Update
Kfl00342_0080 kfl00342_0080_v1.1 (at4g26600 : 543.0) S-adenosyl-L-methionine-dependent... 0.02 Orthogroups_2024-Update
LOC_Os09g37860 No alias NOL1/NOP2/sun family protein, putative, expressed 0.06 Orthogroups_2024-Update
Mp6g04100.1 No alias OLI2 LSU processome maturation factor 0.03 Orthogroups_2024-Update
Potri.001G369600 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.11 Orthogroups_2024-Update
Pp1s230_76V6 No alias nucleolar protein 120kda 0.03 Orthogroups_2024-Update
Seita.1G301700.1 No alias rRNA methyltransferase *(NOP2) 0.07 Orthogroups_2024-Update
Sobic.004G256000.1 No alias rRNA methyltransferase *(NOP2) 0.12 Orthogroups_2024-Update
Solyc07g052110 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.04 Orthogroups_2024-Update
evm.model.contig_2251.1 No alias (at5g55920 : 395.0) Encodes a homolog of the S.... 0.04 Orthogroups_2024-Update
evm.model.tig00000114.21 No alias (at4g26600 : 466.0) S-adenosyl-L-methionine-dependent... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR031341 Methyltr_RsmF_N 215 292
IPR001678 MeTrfase_RsmB/NOP2 296 506
No external refs found!