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  5. Solyc02g088920

Solyc02g088920


Description : Nuclear transport factor 2 family protein with RNA binding domain isoform 2 (AHRD V3.3 *** A0A061EH36_THECC)


Gene families : OG_42_0000547 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g088920
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Solyc10g083060 No alias Nuclear transport factor 2 family protein with RNA... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002075 NTF2 17 133
IPR000504 RRM_dom 300 358
No external refs found!