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  5. Sopen10g016980

Sopen10g016980


Description : Glycosyl hydrolase family 3 N terminal domain


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g016980
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
112087 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
A4A49_10220 No alias beta-xylosidasealpha-l-arabinofuranosidase 2 0.03 Orthogroups_2024-Update
A4A49_38116 No alias putative beta-d-xylosidase 2 0.06 Orthogroups_2024-Update
Bradi2g48457 No alias beta-xylosidase 2 0.02 Orthogroups_2024-Update
Bradi4g20197 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
Brara.E02235.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Brara.I00420.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Orthogroups_2024-Update
Brara.J02367.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
HORVU2Hr1G091270.4 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Orthogroups_2024-Update
LOC_Os04g54810 No alias beta-D-xylosidase, putative, expressed 0.02 Orthogroups_2024-Update
MA_102349g0010 No alias (at5g64570 : 473.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
MA_39151g0010 No alias (at1g02640 : 719.0) encodes a protein similar to a... 0.02 Orthogroups_2024-Update
MA_4577g0010 No alias (at5g64570 : 920.0) Encodes a beta-d-xylosidase that... 0.04 Orthogroups_2024-Update
MA_77922g0010 No alias (at5g64570 : 973.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
PSME_00001210-RA No alias (at1g78060 : 831.0) Glycosyl hydrolase family protein;... 0.03 Orthogroups_2024-Update
PSME_00023182-RA No alias (at5g10560 : 365.0) Glycosyl hydrolase family protein;... 0.02 Orthogroups_2024-Update
PSME_00042009-RA No alias (at5g64570 : 926.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
Potri.001G206800 No alias beta-D-xylosidase 4 0.03 Orthogroups_2024-Update
Potri.002G093900 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
Potri.010G141400 No alias beta-xylosidase 1 0.03 Orthogroups_2024-Update
Seita.1G323200.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Orthogroups_2024-Update
Seita.7G257800.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Orthogroups_2024-Update
Seita.8G230000.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Orthogroups_2024-Update
Solyc01g104950 No alias LEXYL2 0.03 Orthogroups_2024-Update
Solyc11g044910 No alias Beta-D-xylosidase family protein (AHRD V3.3 *** B9HWX2_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 117 355
IPR026891 Fn3-like 696 761
IPR002772 Glyco_hydro_3_C 405 634
No external refs found!