Glyma.18G087700

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.18G087700
Cluster	HCCA clusters: Cluster_213

Target	Alias	Description	ECC score	Gene Family Method
At1g59780	No alias	Putative disease resistance protein At1g59780...	0.03	Orthogroups_2024-Update
At3g46710	No alias	Putative disease resistance RPP13-like protein 2...	0.03	Orthogroups_2024-Update
Bradi4g21842	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Bradi5g03110	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Bradi5g03140	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Brara.H00254.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Glyma.18G082300	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.18G084400	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.18G086900	No alias	NB-ARC domain-containing disease resistance protein	0.04	Orthogroups_2024-Update
LOC_Os02g09790	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g22460	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g45330	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
Potri.003G099150	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.005G034900	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Seita.2G062100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.2G128800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.005G092600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G095000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc01g090430	No alias	NRC1	0.03	Orthogroups_2024-Update
Solyc02g070750	No alias	No description available	0.02	Orthogroups_2024-Update
Solyc04g009290	No alias	Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC)	0.03	Orthogroups_2024-Update
Solyc04g009660	No alias	LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***...	0.06	Orthogroups_2024-Update
Sopen04g004290	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
BP	GO:0016071	mRNA metabolic process	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predicted GO
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
CC	GO:0097525	spliceosomal snRNP complex	IEP	Predicted GO
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Predicted GO
CC	GO:0120114	Sm-like protein family complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	183	426

External Links

No external refs found!

Glyma.18G087700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation