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  5. Glyma.18G120200

Glyma.18G120200


Description : chitinase A


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G120200
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
126203 No alias chitinase A 0.03 Orthogroups_2024-Update
A4A49_02633 No alias acidic endochitinase 0.06 Orthogroups_2024-Update
Bradi2g55610 No alias chitinase A 0.04 Orthogroups_2024-Update
Brara.I00586.1 No alias acidic chitinase *(CHIA) 0.05 Orthogroups_2024-Update
Glyma.09G126200 No alias chitinase A 0.04 Orthogroups_2024-Update
HORVU3Hr1G084220.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
LOC_Os01g47070 No alias glycosyl hydrolase, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g01600.1 No alias Acidic endochitinase SE2 OS=Beta vulgaris... 0.02 Orthogroups_2024-Update
Potri.012G033866 No alias chitinase A 0.02 Orthogroups_2024-Update
Potri.015G024200 No alias chitinase A 0.03 Orthogroups_2024-Update
Seita.5G251600.1 No alias acidic chitinase *(CHIA) 0.05 Orthogroups_2024-Update
Seita.5G389800.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Sobic.003G244600.1 No alias acidic chitinase *(CHIA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 28 282
No external refs found!