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  5. Glyma.18G131300

Glyma.18G131300


Description : matrix metalloproteinase


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G131300
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G037200 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Potri.002G142500 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
Potri.015G103900 No alias Matrixin family protein 0.04 Orthogroups_2024-Update
Sobic.010G099400.1 No alias M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase... 0.04 Orthogroups_2024-Update
Solyc10g018750 No alias Metalloendoproteinase 1, putative (AHRD V3.3 *-* B9RD50_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0031012 extracellular matrix IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 164 319
IPR002477 Peptidoglycan-bd-like 56 111
No external refs found!