Glyma.18G155200


Description : plant U-box 9


Gene families : OG_42_0002375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G155200
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
At3g07360 No alias RING-type E3 ubiquitin transferase... 0.03 Orthogroups_2024-Update
At5g18340 No alias U-box domain-containing protein 48... 0.07 Orthogroups_2024-Update
Glyma.20G220600 No alias plant U-box 9 0.05 Orthogroups_2024-Update
HORVU2Hr1G067610.3 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
MA_106718g0010 No alias (at3g07360 : 294.0) The protein that is predicted to be... 0.02 Orthogroups_2024-Update
PSME_00037843-RA No alias (at3g07360 : 296.0) The protein that is predicted to be... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000225 Armadillo 291 328
IPR003613 Ubox_domain 78 147
No external refs found!