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  5. Glyma.18G181700

Glyma.18G181700


Description : expansin A4


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G181700
Cluster HCCA clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
419575 No alias expansin A16 0.02 Orthogroups_2024-Update
AC234190.1_FG001 No alias expansin A17 0.04 Orthogroups_2024-Update
GRMZM2G074585 No alias expansin 11 0.03 Orthogroups_2024-Update
HORVU6Hr1G075970.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
MA_36587g0010 No alias (at2g40610 : 414.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
MA_915221g0010 No alias (at1g69530 : 376.0) Member of Alpha-Expansin Gene... 0.08 Orthogroups_2024-Update
Mp1g22730.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00035760-RA No alias (at2g40610 : 381.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
Pp1s178_63V6 No alias alpha-expansin 1 0.04 Orthogroups_2024-Update
Sopen06g017810 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 165 242
IPR009009 RlpA-like_DPBB 67 154
No external refs found!