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  5. Glyma.18G181800

Glyma.18G181800


Description : RHOMBOID-like 1


Gene families : OG_42_0000533 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G181800
Cluster HCCA clusters: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
A4A49_00166 No alias rhomboid-like protein 3 0.02 Orthogroups_2024-Update
Brara.I01408.1 No alias protease *(RBL) 0.04 Orthogroups_2024-Update
Brara.J02499.1 No alias protease *(RBL) 0.04 Orthogroups_2024-Update
Glyma.07G132800 No alias RHOMBOID-like 1 0.03 Orthogroups_2024-Update
LOC_Os08g43320 No alias OsRhmbd14 - Putative Rhomboid homologue, expressed 0.02 Orthogroups_2024-Update
Potri.002G090400 No alias Rhomboid-related intramembrane serine protease family protein 0.03 Orthogroups_2024-Update
Seita.9G349500.1 No alias protease *(RBL) 0.05 Orthogroups_2024-Update
Sobic.001G321800.1 No alias protease *(RBL) 0.09 Orthogroups_2024-Update
evm.model.tig00000241.2 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 129 270
No external refs found!