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  5. Glyma.18G182500

Glyma.18G182500


Description : GRAS family transcription factor


Gene families : OG_42_0000237 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G182500
Cluster HCCA clusters: Cluster_471

Target Alias Description ECC score Gene Family Method Actions
149826 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
A4A49_41610 No alias scarecrow-like protein 14 0.03 Orthogroups_2024-Update
Brara.C01893.1 No alias GRAS-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G028608 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G098784 No alias GRAS family transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G346706 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
Glyma.07G133100 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
Glyma.11G138400 No alias SCARECROW-like 14 0.03 Orthogroups_2024-Update
Glyma.13G337600 No alias SCARECROW-like 14 0.06 Orthogroups_2024-Update
PSME_00039251-RA No alias (at2g37650 : 288.0) GRAS family transcription factor;... 0.03 Orthogroups_2024-Update
Seita.9G031800.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G301800.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G229400.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G229900.1 No alias GRAS-type transcription factor 0.02 Orthogroups_2024-Update
Solyc04g011630 No alias Transcription factor GRAS (AHRD V3.3 *-* A0A103Y9C7_CYNCS) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 365 735
No external refs found!