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  5. Glyma.18G183500

Glyma.18G183500


Description : laccase 17


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G183500
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
A4A49_01901 No alias laccase-15 0.04 Orthogroups_2024-Update
A4A49_05486 No alias laccase-17 0.03 Orthogroups_2024-Update
A4A49_13107 No alias laccase-14 0.03 Orthogroups_2024-Update
A4A49_27562 No alias laccase-17 0.03 Orthogroups_2024-Update
A4A49_28011 No alias laccase-2 0.03 Orthogroups_2024-Update
At1g18140 No alias Laccase-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMS3] 0.03 Orthogroups_2024-Update
Bradi2g54680 No alias laccase 17 0.02 Orthogroups_2024-Update
Bradi2g54740 No alias laccase 2 0.02 Orthogroups_2024-Update
Brara.B00033.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.B00087.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.E00552.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Glyma.20G172600 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G072470.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
HORVU3Hr1G086160.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
LOC_Os01g44330 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g38420 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_33288g0010 No alias (at5g05390 : 575.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
Mp3g20310.1 No alias Laccase-2 OS=Oryza sativa subsp. japonica... 0.02 Orthogroups_2024-Update
PSME_00024243-RA No alias (at2g38080 : 333.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
Potri.006G087100 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.006G087500 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.008G064000 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.019G124300 No alias laccase 3 0.04 Orthogroups_2024-Update
Seita.5G377700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Seita.9G453900.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Solyc10g076830 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.04 Orthogroups_2024-Update
Solyc10g085090 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.03 Orthogroups_2024-Update
Sopen10g028490 No alias Multicopper oxidase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 166 317
IPR011707 Cu-oxidase_3 40 154
IPR011706 Cu-oxidase_2 436 557
No external refs found!