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  5. Glyma.18G183700

Glyma.18G183700


Description : laccase 17


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G183700
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Bradi1g66720 No alias laccase 17 0.03 Orthogroups_2024-Update
Brara.B00173.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Brara.D02326.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Brara.H02436.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
GRMZM2G309594 No alias laccase 7 0.03 Orthogroups_2024-Update
GRMZM2G367668 No alias laccase 2 0.02 Orthogroups_2024-Update
Glyma.01G108200 No alias laccase 7 0.03 Orthogroups_2024-Update
LOC_Os10g30140 No alias laccase-16, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g01730 No alias laccase-23 precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_28768g0010 No alias (at2g38080 : 580.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
MA_75861g0010 No alias (at1g18140 : 648.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00005164-RA No alias (at5g05390 : 649.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00008221-RA No alias (at5g05390 : 632.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.006G087500 No alias laccase 17 0.04 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.03 Orthogroups_2024-Update
Solyc06g076330 No alias Laccase (AHRD V3.3 *** M1CZK5_SOLTU) 0.03 Orthogroups_2024-Update
Solyc09g011000 No alias No description available 0.04 Orthogroups_2024-Update
Sopen09g005720 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 170 321
IPR011707 Cu-oxidase_3 44 157
IPR011706 Cu-oxidase_2 436 567
No external refs found!