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  5. Glyma.18G191900

Glyma.18G191900


Description : copper transporter 1


Gene families : OG_42_0001603 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001603_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G191900
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Brara.B01109.1 No alias copper cation channel *(COPT) & copper transporter *(COPT) 0.03 Orthogroups_2024-Update
Brara.B01110.1 No alias copper cation channel *(COPT) & copper transporter *(COPT) 0.03 Orthogroups_2024-Update
Glyma.07G141600 No alias Ctr copper transporter family 0.01 Orthogroups_2024-Update
Seita.5G333000.1 No alias copper transporter *(COPT) & copper cation channel *(COPT) 0.03 Orthogroups_2024-Update
Sobic.003G310200.1 No alias copper cation channel *(COPT) & copper transporter *(COPT) 0.02 Orthogroups_2024-Update
Sobic.005G059300.1 No alias copper cation channel *(COPT) & copper transporter *(COPT) 0.02 Orthogroups_2024-Update
Sobic.006G074100.1 No alias copper cation channel *(COPT) & copper transporter *(COPT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0035434 copper ion transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007274 Cop_transporter 32 73
IPR007274 Cop_transporter 91 133
No external refs found!