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  5. Glyma.18G197400

Glyma.18G197400


Description : Laccase/Diphenol oxidase family protein


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G197400
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
A4A49_64623 No alias laccase-5 0.03 Orthogroups_2024-Update
At5g07130 No alias Laccase-13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYQ2] 0.04 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.02 Orthogroups_2024-Update
Brara.J02661.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
MA_10433807g0010 No alias (q40588|aso_tobac : 375.0) L-ascorbate oxidase precursor... 0.02 Orthogroups_2024-Update
MA_28768g0010 No alias (at2g38080 : 580.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
MA_897132g0010 No alias (at2g40370 : 560.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00001502-RA No alias (at2g38080 : 615.0) Encodes a protein with similarity to... 0.04 Orthogroups_2024-Update
PSME_00005164-RA No alias (at5g05390 : 649.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00013636-RA No alias (at2g40370 : 639.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00015371-RA No alias (at5g05390 : 674.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00018934-RA No alias (at5g05390 : 747.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00030935-RA No alias (at5g05390 : 627.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00031239-RA No alias (at1g18140 : 634.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00031560-RA No alias (at5g05390 : 678.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00033093-RA No alias (at2g40370 : 637.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00042619-RA No alias (at5g05390 : 581.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044158-RA No alias (at2g40370 : 673.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
Seita.9G453900.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Sobic.003G352700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
Sobic.004G236100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Sopen04g028460 No alias Multicopper oxidase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 430 522
IPR011707 Cu-oxidase_3 33 143
IPR001117 Cu-oxidase 156 308
No external refs found!