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  5. Glyma.18G210400

Glyma.18G210400


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G210400
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G040800 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Glyma.09G278400 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
LOC_Os02g45980 No alias ZR1 protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G070300 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 611 677
IPR000408 Reg_chr_condens 338 388
IPR000408 Reg_chr_condens 506 555
IPR000408 Reg_chr_condens 392 441
IPR000408 Reg_chr_condens 560 607
IPR000408 Reg_chr_condens 285 333
IPR000408 Reg_chr_condens 457 503
IPR013591 Brevis_radix_dom 998 1052
IPR001849 PH_domain 16 123
IPR027988 BRX_N 860 895
No external refs found!