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  5. Glyma.18G235600

Glyma.18G235600


Description : brassinosteroid-responsive RING-H2


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G235600
Cluster HCCA clusters: Cluster_476

Target Alias Description ECC score Gene Family Method Actions
A4A49_03376 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_28369 No alias e3 ubiquitin-protein ligase rha1b 0.03 Orthogroups_2024-Update
At3g61460 No alias BRH1 RING finger protein [Source:UniProtKB/TrEMBL;Acc:Q9XF92] 0.03 Orthogroups_2024-Update
Brara.C02915.1 No alias E3 ubiquitin ligase *(BRH) 0.04 Orthogroups_2024-Update
Brara.G00433.1 No alias E3 ubiquitin ligase *(XERICO) 0.03 Orthogroups_2024-Update
Glyma.01G093800 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
Glyma.16G034100 No alias brassinosteroid-responsive RING-H2 0.04 Orthogroups_2024-Update
HORVU0Hr1G005330.5 No alias E3 ubiquitin ligase *(BRH) 0.04 Orthogroups_2024-Update
HORVU4Hr1G051840.1 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os07g48680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os10g30310 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10266950g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10433991g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_4795437g0010 No alias (at3g43430 : 102.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00056848-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.005G081200 No alias RING-H2 finger A2A 0.03 Orthogroups_2024-Update
Potri.010G133700 No alias brassinosteroid-responsive RING-H2 0.04 Orthogroups_2024-Update
Seita.2G245100.1 No alias E3 ubiquitin ligase *(XERICO) 0.03 Orthogroups_2024-Update
Seita.6G056400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G280900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g054370 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT5G41400.1) 0.04 Orthogroups_2024-Update
Solyc05g010170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.03 Orthogroups_2024-Update
Solyc08g081370 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G63840.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:0090231 regulation of spindle checkpoint IEP Predicted GO
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP Predicted GO
BP GO:1901976 regulation of cell cycle checkpoint IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1903504 regulation of mitotic spindle checkpoint IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 92 135
No external refs found!