Glyma.18G249502

Description : WRKY family transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.18G249502
Cluster	HCCA clusters: Cluster_396

Target	Alias	Description	ECC score	Gene Family Method
77979	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
AC209050.3_FG003	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
GRMZM2G111711	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
Glyma.18G056600	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
HORVU0Hr1G003340.8	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G028340.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os03g33012	No alias	WRKY81, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g25070	No alias	WRKY62, expressed	0.02	Orthogroups_2024-Update
PSME_00016606-RA	No alias	(at1g62300 : 138.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00030013-RA	No alias	(at2g38470 : 151.0) Member of the plant WRKY...	0.03	Orthogroups_2024-Update
PSME_00032293-RA	No alias	(at4g01720 : 163.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00037224-RA	No alias	(at2g38470 : 152.0) Member of the plant WRKY...	0.03	Orthogroups_2024-Update
PSME_00041689-RA	No alias	(at1g29860 : 111.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00042021-RA	No alias	(at4g22070 : 263.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Seita.5G132800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.8G123100.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G202800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Solyc12g011200	No alias	WRKY transcription factor 28	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	Predicted GO
BP	GO:0006400	tRNA modification	IEP	Predicted GO
BP	GO:0008033	tRNA processing	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008175	tRNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
MF	GO:0016426	tRNA (adenine) methyltransferase activity	IEP	Predicted GO
MF	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	IEP	Predicted GO
BP	GO:0030488	tRNA methylation	IEP	Predicted GO
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Predicted GO
BP	GO:0032259	methylation	IEP	Predicted GO
CC	GO:0034708	methyltransferase complex	IEP	Predicted GO
BP	GO:0043414	macromolecule methylation	IEP	Predicted GO
CC	GO:0043527	tRNA methyltransferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	152	208

External Links

No external refs found!

Glyma.18G249502

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation