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  5. Glyma.18G260900

Glyma.18G260900


Description : expansin A1


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G260900
Cluster HCCA clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
A4A49_26925 No alias expansin-a10 0.03 Orthogroups_2024-Update
At3g29030 No alias At3g29030 [Source:UniProtKB/TrEMBL;Acc:Q1ECM3] 0.04 Orthogroups_2024-Update
Kfl00229_0040 kfl00229_0040_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00050514-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
Sobic.003G128800.1 No alias alpha-class expansin 0.07 Orthogroups_2024-Update
Solyc06g049050 No alias expansin 2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 84 161
IPR007117 Expansin_CBD 172 249
No external refs found!