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  5. Glyma.18G273600

Glyma.18G273600


Description : AGAMOUS-like 8


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G273600
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
A4A49_22632 No alias floral homeotic protein agamous 0.03 Orthogroups_2024-Update
A4A49_63038 No alias agamous-like mads-box protein agl19 0.03 Orthogroups_2024-Update
At2g45660 No alias SOC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL4] 0.03 Orthogroups_2024-Update
At4g36590 No alias MADS-box protein [Source:UniProtKB/TrEMBL;Acc:O23222] 0.04 Orthogroups_2024-Update
Brara.B03164.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.C00694.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.D02757.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E02241.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H01136.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K00360.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.05 Orthogroups_2024-Update
Glyma.08G105400 No alias K-box region and MADS-box transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.13G223300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.18G004700 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G032300.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
HORVU1Hr1G047560.2 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
HORVU1Hr1G063620.2 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
HORVU3Hr1G026650.1 No alias MADS/AGL-type transcription factor 0.05 Orthogroups_2024-Update
HORVU6Hr1G066140.9 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
LOC_Os02g36924 No alias OsMADS27 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g49150 No alias OsMADS17 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Potri.004G131100 No alias AGAMOUS-like 29 0.05 Orthogroups_2024-Update
Potri.008G041500 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Potri.009G055700 No alias AGAMOUS-like 15 0.03 Orthogroups_2024-Update
Pp1s55_280V6 No alias mikc* mads-box transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G406800.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G162300.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sopen02g015950 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 44 91
IPR002487 TF_Kbox 123 203
No external refs found!