Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.18G275000 | |
Cluster | HCCA clusters: Cluster_88 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
171135 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
At1g13410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein... | 0.03 | Orthogroups_2024-Update | |
Bradi3g51740 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Brara.F00497.1 | No alias | RNA editing factor *(OTP82) | 0.03 | Orthogroups_2024-Update | |
GRMZM2G121579 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G455587 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.01G048100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G150300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU2Hr1G107430.1 | No alias | RNA editing factor *(MEF10) | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G080810.1 | No alias | RNA editing factor *(MEF10) | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g45840 | No alias | CRR2, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os03g62690 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g33920 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_385322g0010 | No alias | (at1g08070 : 385.0) Encodes a chloroplast RNA editing... | 0.03 | Orthogroups_2024-Update | |
Mp8g01790.1 | No alias | ssDNA-binding protein (OSB) | 0.03 | Orthogroups_2024-Update | |
PSME_00006159-RA | No alias | (at3g46790 : 260.0) Encodes a member of a PCMP (plant... | 0.04 | Orthogroups_2024-Update | |
PSME_00006511-RA | No alias | (at1g11290 : 568.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
PSME_00033049-RA | No alias | (at1g11290 : 583.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
PSME_00048581-RA | No alias | (at4g02750 : 590.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00048766-RA | No alias | (at4g02750 : 577.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
Potri.012G109300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.5G243300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.9G213100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.009G079400.1 | No alias | RNA editing factor *(ECD1) | 0.03 | Orthogroups_2024-Update | |
Solyc01g110010 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc07g008480 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Sopen02g018640 | No alias | PPR repeat family | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | Predicted GO |
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Predicted GO |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Predicted GO |
BP | GO:0009056 | catabolic process | IEP | Predicted GO |
BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016229 | steroid dehydrogenase activity | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Predicted GO |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predicted GO |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Predicted GO |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
No external refs found! |