1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.18G277000

Glyma.18G277000


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009640 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009640_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.18G277000
Cluster HCCA clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G304965 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Solyc06g082880 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Sopen06g034240 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0030674 protein binding, bridging IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0051015 actin filament binding IEP Predicted GO
MF GO:0060090 molecular adaptor activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 780 837
IPR002885 Pentatricopeptide_repeat 102 148
IPR002885 Pentatricopeptide_repeat 506 553
IPR002885 Pentatricopeptide_repeat 607 654
IPR002885 Pentatricopeptide_repeat 405 452
IPR002885 Pentatricopeptide_repeat 480 505
IPR002885 Pentatricopeptide_repeat 205 234
IPR002885 Pentatricopeptide_repeat 45 71
IPR002885 Pentatricopeptide_repeat 379 404
IPR002885 Pentatricopeptide_repeat 307 335
IPR002885 Pentatricopeptide_repeat 681 705
IPR002885 Pentatricopeptide_repeat 177 203
No external refs found!