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  5. Glyma.19G004900

Glyma.19G004900


Description : LOB domain-containing protein 25


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G004900
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
At2g40470 No alias LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
At3g27650 No alias LOB domain-containing protein 25... 0.04 Orthogroups_2024-Update
At5g15060 No alias LOB domain-containing protein 34... 0.03 Orthogroups_2024-Update
Brara.E01292.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F02209.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G092517 No alias LOB domain-containing protein 13 0.02 Orthogroups_2024-Update
Glyma.05G040500 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Orthogroups_2024-Update
Glyma.11G152333 No alias LOB domain-containing protein 1 0.04 Orthogroups_2024-Update
Glyma.15G045200 No alias LOB domain-containing protein 11 0.03 Orthogroups_2024-Update
HORVU1Hr1G064640.3 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os09g19950 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429262g0010 No alias (at5g63090 : 192.0) Involved in lateral organ... 0.03 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.06 Orthogroups_2024-Update
PSME_00048626-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
Potri.018G052700 No alias LOB domain-containing protein 22 0.04 Orthogroups_2024-Update
Seita.9G168800.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc06g082310 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen11g021180 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0047750 cholestenol delta-isomerase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 10 106
No external refs found!