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  5. Solyc02g089130

Solyc02g089130


Description : COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g089130
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
At1g09790 No alias COBRA-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O04500] 0.03 Orthogroups_2024-Update
At3g29810 No alias COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7] 0.05 Orthogroups_2024-Update
Bradi1g59880 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.05 Orthogroups_2024-Update
Bradi5g17087 No alias COBRA-like protein 1 precursor 0.02 Orthogroups_2024-Update
Glyma.04G160000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Glyma.06G005800 No alias COBRA-like protein 1 precursor 0.03 Orthogroups_2024-Update
HORVU0Hr1G004650.4 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
HORVU4Hr1G014530.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
LOC_Os03g30260 No alias COBRA-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00020470-RA No alias (q60e70|cobl3_orysa : 714.0) COBRA-like 3 protein... 0.03 Orthogroups_2024-Update
Solyc03g114890 No alias COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 45 206
No external refs found!