Glyma.19G016700

Description : ABC transporter family protein

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.19G016700
Cluster	HCCA clusters: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
230688	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
A4A49_15329	No alias	abc transporter b family member 20	0.03	Orthogroups_2024-Update
At3g28390	No alias	ABC transporter B family member 18...	0.03	Orthogroups_2024-Update
Bradi2g17710	No alias	P-glycoprotein 11	0.04	Orthogroups_2024-Update
Bradi2g36897	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Bradi2g47400	No alias	ATP binding cassette subfamily B4	0.07	Orthogroups_2024-Update
Brara.F03154.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Brara.H03115.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
GRMZM2G004748	No alias	P-glycoprotein 2	0.03	Orthogroups_2024-Update
Glyma.06G139500	No alias	ATP binding cassette subfamily B19	0.04	Orthogroups_2024-Update
Glyma.15G090200	No alias	P-glycoprotein 9	0.03	Orthogroups_2024-Update
Glyma.18G012700	No alias	P-glycoprotein 18	0.03	Orthogroups_2024-Update
LOC_Os01g35030	No alias	MDR-like ABC transporter, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g54930	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_10432922g0010	No alias	(at3g28345 : 1138.0) ABC transporter family protein;...	0.03	Orthogroups_2024-Update
MA_18604g0010	No alias	(at1g02530 : 195.0) P-glycoprotein 12 (PGP12); FUNCTIONS...	0.02	Orthogroups_2024-Update
Mp3g11830.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Orthogroups_2024-Update
PSME_00005534-RA	No alias	(at3g62150 : 1137.0) P-glycoprotein 21 (PGP21);...	0.03	Orthogroups_2024-Update
PSME_00011041-RA	No alias	(at4g25960 : 1546.0) P-glycoprotein 2 (PGP2); FUNCTIONS...	0.06	Orthogroups_2024-Update
PSME_00023263-RA	No alias	(q6yuu5\|mdr_orysa : 1044.0) Putative multidrug...	0.04	Orthogroups_2024-Update
PSME_00023484-RA	No alias	(at2g36910 : 1766.0) Belongs to the family of...	0.02	Orthogroups_2024-Update
PSME_00035518-RA	No alias	(at2g39480 : 1505.0) P-glycoprotein 6 (PGP6); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00038380-RA	No alias	(q6yuu5\|mdr_orysa : 1204.0) Putative multidrug...	0.03	Orthogroups_2024-Update
Potri.002G019600	No alias	P-glycoprotein 13	0.02	Orthogroups_2024-Update
Potri.003G094400	No alias	P-glycoprotein 2	0.02	Orthogroups_2024-Update
Pp1s338_12V6	No alias	multidrug pheromone mdr abc transporter family	0.03	Orthogroups_2024-Update
Seita.5G031800.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Solyc03g005860	No alias	ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR)	0.02	Orthogroups_2024-Update
Solyc06g009280	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.03	Orthogroups_2024-Update
Solyc08g076720	No alias	ABC transporter B family-like protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen02g032160	No alias	ABC transporter transmembrane region	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	377	526
IPR011527	ABC1_TM_dom	35	300
IPR011527	ABC1_TM_dom	675	938
IPR003439	ABC_transporter-like	1016	1165

External Links

No external refs found!

Glyma.19G016700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation