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Description : Pectate lyase family protein
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.19G020200 | |
| Cluster | HCCA clusters: Cluster_539 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g11920 | No alias | Putative pectate lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65388] | 0.03 | Orthogroups_2024-Update | |
| At1g30350 | No alias | Probable pectate lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8G4] | 0.03 | Orthogroups_2024-Update | |
| At3g01270 | No alias | Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70] | 0.04 | Orthogroups_2024-Update | |
| At5g09280 | No alias | Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q9FY87] | 0.03 | Orthogroups_2024-Update | |
| Bradi3g08035 | No alias | Pectate lyase family protein | 0.02 | Orthogroups_2024-Update | |
| Brara.B00588.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G011200 | No alias | Pectin lyase-like superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.18G255900 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os06g38520 | No alias | pectate lyase family protein, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_101171g0010 | No alias | (at1g67750 : 487.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_10426822g0020 | No alias | (at1g67750 : 481.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_10430145g0020 | No alias | (at5g48900 : 488.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_10433252g0010 | No alias | (at3g24670 : 194.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_10437227g0010 | No alias | (at4g24780 : 367.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_10437227g0020 | No alias | (at4g13710 : 576.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_10437227g0030 | No alias | (at3g24670 : 413.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
| MA_203992g0010 | No alias | (at4g24780 : 544.0) Pectin lyase-like superfamily... | 0.04 | Orthogroups_2024-Update | |
| MA_91467g0010 | No alias | (at4g24780 : 570.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_91467g0020 | No alias | (at4g24780 : 289.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_97947g0010 | No alias | (at1g67750 : 510.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
| PSME_00041064-RA | No alias | (at1g67750 : 595.0) Pectate lyase family protein;... | 0.02 | Orthogroups_2024-Update | |
| Potri.008G032700 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.011G008100 | No alias | root hair specific 14 | 0.03 | Orthogroups_2024-Update | |
| Potri.011G093400 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.015G087800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s173_162V6 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
| Pp1s355_16V6 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
| Pp1s84_82V6 | No alias | pectate lyase | 0.02 | Orthogroups_2024-Update | |
| Solyc02g087670 | No alias | Pectate lyase (AHRD V3.3 *** K4BBS3_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Solyc03g113150 | No alias | Pectate lyase (AHRD V3.3 *** K4BKG8_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Sopen01g006390 | No alias | Pectate lyase | 0.03 | Orthogroups_2024-Update | |
| Sopen03g030810 | No alias | Pectate lyase | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030570 | pectate lyase activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0006812 | cation transport | IEP | Predicted GO |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
| BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
| MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
| MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
| BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
| BP | GO:0051179 | localization | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
| BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
| MF | GO:0098772 | molecular function regulator | IEP | Predicted GO |
| No external refs found! |