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  5. Glyma.19G026400

Glyma.19G026400


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G026400
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AC195864.3_FG017 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
At2g36730 No alias Pentatricopeptide repeat-containing protein At2g36730... 0.04 Orthogroups_2024-Update
GRMZM2G099875 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G177715 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G206900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G311600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G209700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G001760.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G074220.1 No alias RNA editing factor *(MEF21) 0.04 Orthogroups_2024-Update
HORVU3Hr1G052470.6 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_49545g0010 No alias (at1g11290 : 523.0) Pentatricopeptide Repeat Protein... 0.04 Orthogroups_2024-Update
PSME_00028969-RA No alias (at4g13650 : 580.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
PSME_00034399-RA No alias (at4g33170 : 426.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00054324-RA No alias (at3g24000 : 542.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
Pp1s15_448V6 No alias MZB10.7; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update
Pp1s26_188V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s276_42V6 No alias F4I10.100; pentatricopeptide (PPR) repeat-containing... 0.03 Orthogroups_2024-Update
Seita.6G159500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g093630 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc11g006700 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 114 137
IPR002885 Pentatricopeptide_repeat 145 166
IPR002885 Pentatricopeptide_repeat 40 87
IPR002885 Pentatricopeptide_repeat 237 285
No external refs found!