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  5. Glyma.19G032600

Glyma.19G032600


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0002920 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G032600
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
At4g20050 No alias Pectin lyase-like superfamily protein [Source:TAIR;Acc:AT4G20050] 0.03 Orthogroups_2024-Update
PSME_00007472-RA No alias (at4g20050 : 479.0) Encodes a polygalacturonase that... 0.03 Orthogroups_2024-Update
Potri.003G074600 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Pp1s398_21V6 No alias F18F4.150; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc02g068400 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G20050.5) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 86 305
No external refs found!