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  5. Glyma.19G041600

Glyma.19G041600


Description : TRICHOME BIREFRINGENCE-LIKE 19


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G041600
Cluster HCCA clusters: Cluster_543

Target Alias Description ECC score Gene Family Method Actions
Bradi1g43730 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.03 Orthogroups_2024-Update
Bradi1g43740 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.03 Orthogroups_2024-Update
Brara.B01508.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.13G230100 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.04 Orthogroups_2024-Update
HORVU7Hr1G039420.8 No alias xyloglucan O-acetyltransferase *(AXY4) 0.02 Orthogroups_2024-Update
Potri.004G105600 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.03 Orthogroups_2024-Update
Solyc02g065600 No alias Trichome birefringence-like 19 (AHRD V3.3 *** A0A061EH35_THECC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 67 120
IPR026057 PC-Esterase 121 409
No external refs found!