Description : PIF1 helicase
Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.19G051300 | |
Cluster | HCCA clusters: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g51700 | No alias | ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9SCT8] | 0.03 | Orthogroups_2024-Update | |
Glyma.01G057801 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
Glyma.01G135100 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.07G171700 | No alias | PIF1 helicase | 0.06 | Orthogroups_2024-Update | |
Glyma.09G080200 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.10G096000 | No alias | PIF1 helicase | 0.05 | Orthogroups_2024-Update | |
Glyma.12G111300 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.13G154900 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
Glyma.15G190000 | No alias | Function unknown | 0.06 | Orthogroups_2024-Update | |
Glyma.15G193800 | No alias | PIF1 helicase | 0.07 | Orthogroups_2024-Update | |
Glyma.16G109000 | No alias | PIF1 helicase | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g28820 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os12g35410 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
Seita.1G148500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.1G149400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.4G159100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.5G402100.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.9G083700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc01g017850 | No alias | LOW QUALITY:PIF1-like helicase (AHRD V3.3 *-* A0A072TJC6_MEDTR) | 0.03 | Orthogroups_2024-Update | |
Sopen11g011570 | No alias | PIF1-like helicase | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEA | InterProScan predictions |
MF | GO:0003678 | DNA helicase activity | IEA | InterProScan predictions |
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
MF | GO:0016160 | amylase activity | IEP | Predicted GO |
MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0016887 | ATPase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR010285 | DNA_helicase_pif1-like | 141 | 478 |
No external refs found! |