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  5. Glyma.19G058900

Glyma.19G058900


Description : RmlC-like cupins superfamily protein


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G058900
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
270502 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
444186 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
446428 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
92738 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
A4A49_13720 No alias nectarin-1 0.03 Orthogroups_2024-Update
A4A49_30960 No alias nectarin-1 0.03 Orthogroups_2024-Update
At3g10080 No alias RmlC-like cupins superfamily protein... 0.04 Orthogroups_2024-Update
At5g39190 No alias Germin-like protein subfamily 1 member 20... 0.03 Orthogroups_2024-Update
Bradi1g11930 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g08790 No alias germin-like protein 10 0.03 Orthogroups_2024-Update
Brara.I04285.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G096100 No alias germin-like protein 10 0.03 Orthogroups_2024-Update
GRMZM2G149714 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G151249 No alias germin-like protein 4 0.03 Orthogroups_2024-Update
Glyma.02G007900 No alias germin-like protein 10 0.04 Orthogroups_2024-Update
Glyma.16G060800 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G061400 No alias RmlC-like cupins superfamily protein 0.05 Orthogroups_2024-Update
Glyma.20G110100 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G009390.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G017170.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G107930.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G090190.4 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU6Hr1G066380.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G089450.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G036720.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os12g05840 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00052809-RA No alias (at5g20630 : 236.0) Encodes a germin-like protein. Its... 0.04 Orthogroups_2024-Update
PSME_00054465-RA No alias (at1g09560 : 210.0) germin-like protein (GLP5);... 0.04 Orthogroups_2024-Update
PSME_00055226-RA No alias (at5g39110 : 131.0) RmlC-like cupins superfamily... 0.03 Orthogroups_2024-Update
PSME_00055631-RA No alias (at4g14630 : 229.0) germin-like protein with N-terminal... 0.03 Orthogroups_2024-Update
Potri.001G464000 No alias germin-like protein 2 0.04 Orthogroups_2024-Update
Potri.001G464500 No alias germin-like protein 2 0.03 Orthogroups_2024-Update
Seita.9G131200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G066900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g035090 No alias Cupin 0.03 Orthogroups_2024-Update
Sopen09g032950 No alias Cupin 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 62 206
No external refs found!