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Sopen10g019480


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g019480
Cluster HCCA clusters: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
A4A49_24733 No alias phosphoglucomutase, cytoplasmic 0.05 Orthogroups_2024-Update
Solyc01g016570 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g009970 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen07g008680 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen08g022800 No alias gag-polypeptide of LTR copia-type 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 314 365
IPR001584 Integrase_cat-core 383 494
IPR013103 RVT_2 631 751
No external refs found!