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  5. Glyma.19G078600

Glyma.19G078600


Description : RING domain ligase1


Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G078600
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
At1g79380 No alias E3 ubiquitin-protein ligase RGLG4... 0.03 Orthogroups_2024-Update
Bradi2g61442 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.04 Orthogroups_2024-Update
Bradi4g39040 No alias RING domain ligase2 0.02 Orthogroups_2024-Update
Brara.B03874.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.03 Orthogroups_2024-Update
Brara.F02278.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.03 Orthogroups_2024-Update
Brara.G02741.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.03 Orthogroups_2024-Update
Glyma.04G211000 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.03 Orthogroups_2024-Update
HORVU5Hr1G091920.4 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.04 Orthogroups_2024-Update
Solyc09g065870 No alias E3 ubiquitin-protein ligase RGLG2-like protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010734 Copine 117 331
No external refs found!