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  5. Glyma.19G100200

Glyma.19G100200


Description : auxin signaling F-box 3


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G100200
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
75487 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
At3g62980 No alias TIR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA54] 0.03 Orthogroups_2024-Update
Brara.C02040.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
GRMZM5G848945 No alias auxin signaling F-box 3 0.02 Orthogroups_2024-Update
HORVU1Hr1G073230.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
LOC_Os02g52230 No alias coronatine-insensitive protein 1, putative, expressed 0.02 Orthogroups_2024-Update
MA_121693g0010 No alias (at5g49980 : 727.0) auxin F-box protein 5 (AFB5);... 0.03 Orthogroups_2024-Update
MA_14836g0010 No alias (at3g62980 : 733.0) Encodes an auxin receptor that... 0.03 Orthogroups_2024-Update
Mp6g02750.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.03 Orthogroups_2024-Update
PSME_00027400-RA No alias (at2g39940 : 611.0) Encodes a protein containing... 0.03 Orthogroups_2024-Update
Pp1s12_347V6 No alias coronitine insensitive 1 0.07 Orthogroups_2024-Update
Pp1s187_72V6 No alias TLP3B TIR1-like auxin receptor protein 0.02 Orthogroups_2024-Update
Sobic.009G157200.1 No alias component *(COI) of jasmonic acid receptor complex 0.02 Orthogroups_2024-Update
Sopen09g029360 No alias F-box-like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!