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  5. Glyma.19G102600

Glyma.19G102600


Description : hAT transposon superfamily


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G102600
Cluster HCCA clusters: Cluster_372

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G064900 No alias hAT transposon superfamily 0.04 Orthogroups_2024-Update
Glyma.12G105500 No alias hAT dimerisation domain-containing protein / transposase-related 0.03 Orthogroups_2024-Update
Glyma.13G192800 No alias hAT dimerisation domain-containing protein / transposase-related 0.03 Orthogroups_2024-Update
Glyma.14G162700 No alias hAT transposon superfamily 0.05 Orthogroups_2024-Update
Glyma.18G158000 No alias hAT dimerisation domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.20G064800 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
LOC_Os09g32380 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
MA_10332809g0010 No alias (at1g79740 : 151.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
MA_10354504g0010 No alias (at1g79740 : 155.0) hAT transposon superfamily;... 0.02 Orthogroups_2024-Update
PSME_00014035-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00041191-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Solyc04g074610 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003656 Znf_BED 23 57
IPR008906 HATC_C_dom 536 608
IPR007021 DUF659 230 349
No external refs found!