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Description : RING/U-box superfamily protein (AHRD V3.3 *** A0A061EHB8_THECC)
Gene families : OG_42_0000832 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000832_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc02g089240 | |
| Cluster | HCCA clusters: Cluster_166 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM5G865769 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os10g05230 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00040781-RA | No alias | (at5g15790 : 119.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.003G161600 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.017G100100 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Sopen08g029610 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Predicted GO |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | IEP | Predicted GO |
| CC | GO:0005956 | protein kinase CK2 complex | IEP | Predicted GO |
| BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
| BP | GO:0006605 | protein targeting | IEP | Predicted GO |
| BP | GO:0006612 | protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Predicted GO |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| MF | GO:0008312 | 7S RNA binding | IEP | Predicted GO |
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
| MF | GO:0015924 | mannosyl-oligosaccharide mannosidase activity | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
| BP | GO:0022406 | membrane docking | IEP | Predicted GO |
| CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
| BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
| BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
| BP | GO:0045047 | protein targeting to ER | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
| CC | GO:0048500 | signal recognition particle | IEP | Predicted GO |
| BP | GO:0051640 | organelle localization | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0072657 | protein localization to membrane | IEP | Predicted GO |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| BP | GO:0140029 | exocytic process | IEP | Predicted GO |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024766 | Znf_RING_H2 | 165 | 216 |
| No external refs found! |